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Summarise HAI cases

Source: R/summarise_hai.R
summarise_hai.Rd

Totals HAI counts by a chosen variable (e.g. infection type, age group, or sex).

Usage

summarise_hai(
  data,
  by = "Infection_Type",
  as_kable = FALSE,
  caption = "Summary of HAI cases by selected grouping variable."
)

Arguments

data

A data frame like hai_data_clean (must include columns: Infection_Type, Age_Group, Sex, Count)

by

The column name to group by: one of "Infection_Type", "Age_Group", or "Sex".

as_kable

Logical. If TRUE, returns a formatted kable table (requires the knitr and kableExtra packages).

caption

Character. Caption for the table when as_kable = TRUE.

Value

A tibble with columns {by} and Total.

Examples

data("num_hai_patients_by_stratum", package = "BHAI")
#> Warning: data set ‘num_hai_patients_by_stratum’ not found
# summarise_hai(hai_data_clean, by = "Infection_Type")