Overview
BHAIBYE is a teaching package that ships a small, tidy dataset and a Shiny explorer for the burden of healthcare-associated infections (HAIs) in Germany and the EU/EEA. The numbers are based on the published BHAI workflow (Burden of Healthcare-Associated Infections) and let you:
explore per-HAI totals with bubble and bar charts,
compare Germany vs EU/EEA rates per N people,
view 95% uncertainty intervals (UI) for cases, deaths and DALYs.
The package is intentionally lightweight: it’s meant for coursework, demos, and quick exploration.
Installation
You can install the development version of BHAIBYE from GitHub with:
# install.packages("pak")
pak::pak("ETC5523-2025/assignment-4-packages-and-shiny-apps-ruby910113")Dataset Description and Shiny app
Check out the Examples → Getting started with BHAIBYE to learn how to use it.
And you can launch it with:
BHAIBYE::launch_app()Sources & citation
- Article available from Eurosurveillance: https://www.eurosurveillance.org/content/10.2807/1560-7917.ES.2019.24.46.1900135#html_fulltext